ABiMS Software

Software engineering as carried out by ABiMS aims to provide research teams and user communities with databases or tools that best suit their needs. Below is a short alphabetically ordered list of such software applications that have been developed by ABiMS team members. These developments do not include the database projects which can be found here 

Wisca : WiseScaffolder (WiSca) is a stand-alone semi-automatic application for genome scaffolding of pre-assembled contigs using mate-pair data. It also produces editable scaffold maps, allowing either to build gapped scaffolds or usable as a common thread for the manual improvement of scaffolds.