Skip to main content
Home
Analysis and Bioinformatics for Marine Science
  • About Us
    • Fundings
    • Team
    • Networks
    • Collaborations
    • Usage Terms
  • Activities
    • E-infrastructure
    • BioInformatics analysis
    • Data Management
    • Software engineering
    • Support
    • Training
  • Training
    • Courses
    • Past Courses
    • Logistics
  • Resources
    • Tools
      • Software
      • Databanks
      • How To
    • Cluster
      • Description
      • How To
    • Galaxy
      • Description
    • Genomic Resources
      • Description
      • How To
  • Projects
    • List
    • Publications
    • Project request
  • Contact
    • Contact Us
    • Project collaboration
    • Tool request

Breadcrumb

  1. Home

Linux Initiation

By Mark Hoebeke on Wed, 12/04/2024 - 16:49
  • Read more about Linux Initiation
Objectifs
  • Être capable de se connecter à une machine Linux
  • Être capable de transférer des fichiers à partir de/vers une machine Linux
  • Être capable de naviguer dans le système de fichiers
  • Être capable d’examiner le contenu d’un fichier et de gérer l’espace disque
  • Être capable de gérer les droits d’accès aux répertoires et aux fichiers
  • Être capable de gérer le lancement, l’interruption et l’arrêt de processus
Programme
  • Établissement d’une connexion / Utilisation de la ligne de commande
  • Transferts de fichiers (FileZilla/CyberDuck, scp, wget)
  • Commandes pour la navigation dans le système de fichiers (pwd, cd, ls)
  • Commandes pour la manipulation de fichiers (cp, rm, cat, head, less, tar, du...)
  • Commandes pour la gestion des droits d’accès (chown, chmod,chgrp)
  • Commandes pour la gestion des processus (ps, kill, bg, fg)
  • Configuration de la console : fichier .bashrc / (alias)
Public
Personnel scientifique et technique
Prérequis
Aucun
Localisation
Sur site en présentiel
Partie théorique
30 %
Partie pratique
70 %
Durée
1.00 journée(s)
Intervenant·es
Jean-Michel AROUMOUGOM
Mark HOEBEKE
Date
14 May, 2025

Scientific User Committee Meeting

3 December, 2024

The next meeting of the ABiMS Scientific User Committee will take place on Monday, December the 16th, from 3pm to 5pm (CET).

  • Read more about Scientific User Committee Meeting

Satisfaction survey 2024 - results

29 October, 2024

We collected 38 answers to the satisfaction survey about the platform services (over 1,200 referenced users). About 42 % of these answers originate from external users.

  • Read more about Satisfaction survey 2024 - results

Tara microbiome metabarcoding data 1st release

By nhenry on Wed, 11/06/2024 - 15:30
  • Read more about Tara microbiome metabarcoding data 1st release

Assembling and publishing 18S V4 and 16S V4V5 ASV tables Tara Mission Microbiomes MM-OMICS project (https://www.france-genomique.org/projet/mmomics/)

Tara Pacific metabarcoding data 2nd release

By nhenry on Wed, 11/06/2024 - 15:19
  • Read more about Tara Pacific metabarcoding data 2nd release

Assembling and publishing 18S V9 ASV tables from Tara Pacific including the latest data sequenced in 2023

Satisfaction survey (2 min) and training needs

30 September, 2024

https://abims.sb-roscoff.fr/survey

2-min satisfaction survey

  • Read more about Satisfaction survey (2 min) and training needs

FUTURE-OBS Hydromed data & code now avaliable

17 September, 2024

In the framework of the FUTURE-OBS project, and in response to a request from data modeling partners, a dataset including physico-chemical surface measurements from sampling stations in the North W

  • Read more about FUTURE-OBS Hydromed data & code now avaliable

BenthOBS 2024 is out

7 August, 2024

The 2024 release of the consolidated BenthOBS dataset has been made available in SeaNOE at : https://doi.org/10.17882/94768

  • Read more about BenthOBS 2024 is out

PHYTOBS network SNO annual release

By Mark Hoebeke on Wed, 09/25/2024 - 11:02
  • Read more about PHYTOBS network SNO annual release
Annual datasets for the PHYTOBS National Observation Service

BenthOBS SNO annual release

By Mark Hoebeke on Wed, 09/25/2024 - 10:59
  • Read more about BenthOBS SNO annual release
Annual datasets for the BenthOBS National Observation Service

Pagination

  • First page « First
  • Previous page ‹ Previous
  • Page 1
  • Current page 2
  • Page 3
  • Page 4
  • Page 5
  • Page 6
  • Page 7
  • Next page Next ›
  • Last page Last »
Subscribe to

Quick Access

  • E-Infrastructure
    • Tools
    • Cluster
    • Galaxy
    • Genomics Resources
  • Bioanalysis
  • Data Management
  • Software Engineering
  • Support
  • Training
    • Courses
    • Past courses
    • Useful information

News

All news...

Requests

Account

Request the creation of an account.

Project

Request a project collaboration with ABiMS.

Tools

Contact us about tool request.

Support

ABiMS support email.

Copyright (c) CNRS / Sorbonne Université / SCROL - 2024
  • About Us
    • Fundings
    • Team
    • Networks
    • Collaborations
    • Usage Terms
  • Activities
    • E-infrastructure
    • BioInformatics analysis
    • Data Management
    • Software engineering
    • Support
    • Training
  • Training
    • Courses
    • Past Courses
    • Logistics
  • Resources
    • Tools
      • Software
      • Databanks
      • How To
    • Cluster
      • Description
      • How To
    • Galaxy
      • Description
    • Genomic Resources
      • Description
      • How To
  • Projects
    • List
    • Publications
    • Project request
  • Contact
    • Contact Us
    • Project collaboration
    • Tool request
Clear keys input element