Citation system

Complete references to use as signature for the authors or co-authors ABiMS.

Principle : Downward addressing : Organism, laboratory, team and minimal address: postal code, town, country

  • CNRS officer :

CNRS, UPMC, FR2424, ABiMS, Station Biologique, 29680, Roscoff, France

  • UPMC officer :

UPMC, CNRS, FR2424, ABiMS, Station Biologique, 29680, Roscoff, France

JOBIM format

ABiMS, FR2424 CNRS-UPMC, Station Biologique, Place Georges Teissier, 29680, Roscoff, France

Acknowledgement example

The authors thanks the Roscoff Bioinformatic platform : ABiMS (  for providing computational resources/analysis support/etc... .



  • Baptiste Houyvet; Yolande Bouchon-Navaro; Bouchon Claude; Didier Goux; Benoit Bernay; Erwan Corre; Celine Zatylny-Gaudin. Identification of a moronecidin-like antimicrobial peptide in the venomous fish Pterois volitans: functional and structural study of pteroicidin-<alpha>.  accepted in  Fish and Shellfish Immunology. 02/11/2017
  • Simon M. Dittami, Erwan Corre. Detection of bacterial contaminants and hybrid sequences in the genome of the kelp  Saccharina japonica using Taxoblast. accepted in  PeerJ. 30/10/2017
  • Björn Grüning, Ryan Dale, Andreas Sjödin, Jillian Rowe, Brad A. Chapman, Christopher H. Tomkins-Tinch, Renan Valieris, The Bioconda Team (Gildas le Corguillé inside), Johannes Köster.Bioconda: A sustainable and comprehensive software distribution for the life sciences. bioRxiv 207092, October 2017. doi:
  • Bérénice Batut, Saskia Hiltemann, Andrea Bagnacani, Dannon Baker, Vivek Bhardwaj, Clemens Blank, Anthony Bretaudeau, Loraine Guéguen, Martin Čech, John Chilton, Dave Clements, Olivia Doppelt-Azeroual, Anika Erxleben, Mallory Freeberg, Simon Gladman, Youri Hoogstrate, Hans-Rudolf Hotz, Torsten Houwaart, Pratik Jagtap, Delphine Lariviere, Gildas Le Corguillé, Thomas Manke, Fabien Mareuil, Fidel Ramírez, Devon Ryan, Florian Sigloch, Nicola Soranzo, Joachim Wolff, Pavankumar Videm, Markus Wolfien, Aisanjiang Wubuli, Dilmurat Yusuf, Rolf Backofen, Anton Nekrutenko, Björn Grüning. Community-driven data analysis training for biology. bioRxiv 225680; doi:
  • Adriana Lopes dos Santos, Thibaut Pollina, Priscillia Gourvila, Erwan Corre,  Dominique Marie , José Luis Garrido , Francisco Rodríguez , Mary-Hélène Noële, Daniel Vaulot and Wenche Eikrem. Chloropicophyceae, a new class of picoplanktonic prasinophytes from the sunlit oceans.Scientific Reports accepted (1):1-20 · October 2017. DOI: 10.1038/s41598-017-12412-5.
  • Ehsan Kayal, Bastian Bentlage, M. Sabrina Pankey, Aki H. Ohdera, Monica Medina, David C. Plachetzki, Allen G. Collins, Joseph F. Ryan. Comprehensive phylogenomic analyses resolve cnidarian relationships and the origins of key organismal traits. 2017. Accepted in BMC Evolutionary Biology.
  • Lina-Juana Dolch, Guillaume Tourcier, Mariette Bedhomme, Séverine Collin, Leonardo Magneschi, Melissa Conte, Khawla Seddiki, Josselin Lupette, Erwan Corre, Dimitris Petroutsos, Laurent Fourage, Giovanni Finazzi, Fabrice Rébeillé, Juliette Jouhet, Patrick McGuinn, Eric Maréchal. Nitric oxide mediates nitrite-sensing and adaptation and triggers a remodeling of glycerolipids in Phaeodactylum . accepted in  Plant Physiology
  • Thomas F, Bordron P, Eveillard D, Michel G (2017) Gene expression analysis of of Zobellia galactanivorans   during the degradation of algal polysaccharides reveals both  substrate-specific and shared transcriptome-wide responses.  Frontiers in Microbiology, in the press. doi:  10.3389/fmicb.2017.01808
  • Guitton Y, Tremblay-Franco M, Le Corguillé G, Martin JF, Pétéra M, Roger-Mele P, Delabrière A, Goulitquer S, Monsoor M, Duperier C, Canlet C, Servien R, Tardivel P, Caron C, Giacomoni F, Thévenot. E. 2017. Create, run, share, publish, and reference your LC-MS, FIA-MS, GC-MS, and NMR data analysis workflows with the Workflow4Metabolomics 3.0 Galaxy online infrastructure for metabolomics. Int J Biochem Cell Biol. 2017 Jul 12. pii: S1357-2725(17)30157-7. doi: 10.1016/j.biocel.2017.07.002.
  • Jean-Yves Toullec, Erwan Corre, Perrine Mandon, Marcelo Gonzalez-Aravena, Céline Ollivaux and Chi-Ying Lee. Characterization of the neuropeptidome of a Southern Ocean decapod, the shrimp Chorismus antarcticus. Focus on a new decapod ITP-like belonging to the CHH peptide family. General and Comparative Endocrinology ;252:60-78 · July 2017. DOI: 10.1016/j.ygcen.2017.07.015
  • Petra ten Hoopen; Robert D Finn; Lars Ailo Bongo; Erwan Corre; Bruno Fosso; Folker Meyer; Alex Mitchell; Eric Pelletier; Graziano Pesole; Monica Santamaria; Nils Peder Willassen; Guy Cochrane.2017. The metagenomic data life-cycle: standards and best practices. GigaScience · June 2017. DOI: 10.1093/gigascience/gix047 
  • Ritter A., Cabioch L., Brillet-Guéguen L., Corre E., Cosse A., Dartevelle L., Duruflé H., Fasshauer C., Goulitquer S., Thomas F., Correa J. A., Potin P, Faugeron S. and Leblanc C. (2017). Herbivore-induced chemical and molecular responses of the kelps Laminaria digitata and Lessonia spicata. PLOS ONE 12(3): e0173315. doi: 10.1371/journal.pone.0173315
  • Paul Simion, Hervé Philippe, Denis Baurain, Muriel Jager, Daniel J. Richter, Arnaud Di Franco, Béatrice Roure, Nori Satoh, Éric Quéinnec, Alexander Ereskowsky, Pascal Lapébie, Erwan Corre, Frédéric Delsuc, Nicole King, Gert Wörheide & Michaël Manuel Tackling the conundrum of metazoan phylogenomics: sponges are sister to all other animals. accepted in Current Biology  feb. 2017. 
  • Stephane L'Haridon, Erwan Corre, Yue Guan, Manikandan Vinu, Violetta La Cono, Michail Yakimov, Ulrich Stingl, Laurent Toffin, and Mohamed Jebbar. 2017. Complete genome sequence of Methanohalophilus halophilus DSM 3094T. Genome Announcements 5(7) · February 2017. DOI: 10.1128/genomeA.01604-16.
  • Dorrell, Richard G and Gile, Gillian and McCallum, Giselle and Méheust, Raphaël and Bapteste, Eric P and Klinger, Christen M and Brillet-Guéguen, Loraine and Freeman, Katalina D and Richter, Daniel J and Bowler, Chris. (2017). Chimeric origins of ochrophytes and haptophytes revealed through an ancient plastid proteome. eLife, 6, [e23717]. DOI: 10.7554/eLife.23717
  • van Rijswijk M, Beirnaert C, Caron C, Le Corguillé G., et al. The future of metabolomics in ELIXIR. F1000Research 2017, 6 (ELIXIR):1649 (doi: 10.12688/f1000research.12342.1)

Oral communications/ Posters

  • Barbeyron T, Brillet-Guéguen L, Carré W., Carrière C, Caron C, Czjzek M, Hoebeke M, Michel G. Matching the diversity of sulfated biomolecules: creation of a classification database for sulfatases reflecting their substrate specificity. EnzyBio 2017 (GT Enzymes – SFBBM), Le Croisic (9-12 mai 2017). Oral presentation.
  • Houyvet B., Bouchon-Navaro Y., Bouchon C., Bernay B., Corre E., Zatylny-Gaudin C .  Antimicrobial peptides in venomous fish Pterois volitans. 7th International Meeting on Antimicrobial Peptides IMAP University of Copenhagen (Denmark) August 25 -27, 2017.
  • Houyvet B., Zanuttini B., Corre E., Henry J., Zatylny-Gaudin C. Design of antimicrobial peptides from a cuttlefish database. 7th International Meeting on Antimicrobial Peptides IMAP University of Copenhagen ( Denmark)  August 25 -27, 2017
  • Ehsan Kayal, Lourdes Velo Suarez,Laure Guillou, Erwan Corre, Christophe Six, Estelle Bigeard, Dominique Marie. Possible hijacking of the host plastids by an intracellular parasite (Amoebophrya sp., Syndiniales) of microalgae. 15th International Congress of Protistology. 30/7 4/08/2017 Prague Czech Republic
  • Annie Lebreton, Stéphanie Morin-Sardin, Laurence Meslet-Cladière, Jean-Luc Jany, Emmanuel Coton, Georges Barbier, Erwan Corre. Transcriptional studies of five fungal Mucor species. Journées Ouvertes en Biologie, Informatique et Mathématiques (JOBIM), 2017. Lille, 3-6 juillet 2017.
  • Jean-Michel Escoubas, Samuel Dupont, Bruno Petton, Ana Lokmer, Eve Toulza, Caroline Montagnani, David Pecqueur, Laure Guillou, Christelle Desnues, Julien De Lorgeril, Yannick Gueguen, Guillaume Mitta and Erwan Core. A holistic approach to investigate the establishment and dynamics of the blood-microbiota (bacteria, protists and viruses) in a marine invertebrate. IWH17: Interdisciplinary Workshop on Holobionts. University of Bordeaux. BORDEAUX, France, November 6-8, 2017
  • Gobet, A., Corre, E., Correc, G., Delage, L., Dittami, S., Kleinjan, H., Rousvoal, S., Tanguy, G. and Leblanc, C..Characterization of the epiphytic bacterial community associated to the kelp laminaria digitata. IPC 11 11th International Phycological Congress. 13-19 August 2017. Szczecin, Poland.
  • Fabrice Not,Emilie Villar,Arnaud Meng,Charles Bachy,Christophe Six,Lucie Bittner,Cédric Leroux,Adriana Alberti,Damien Eveillar, Erwan Corre. Ecophysiology of plankton photosymbiosis. 15th International Congress of Protistology. 30/7 4/08/2017  Prague Czech Republic
  • Gabriel MARKOV, Jean GIRARD, Camille TROTTIER, Cédric LEROUX, Elodie LACROIX, Ludovic DELAGE, Jonas COLLÉN, Simon DITTAMI, Erwan CORRE, Catherine BOYEN, Anne SIEGEL, Catherine LEBLANC. Patchwork evolution of cholesterol biosynthetic pathway in the model red alga Chondrus crispus. Symposium Substances Naturelles ICSN-UPSACLAY (15ème Symposium ICSN).Gif-sur-Yvette, IMAGIF, 29 et 30 juin 2017.
  • Markov G., Girard J., Trottier C., Guéguen L., Leroux C., Lacroix E., Delage L., Collén J., Dittami S., Corre E., Boyen C., Siegel A., Leblanc C. (2017). Patchwork evolution of metabolic pathways in red and brown macroalgae. Communication orale, 8th annual meeting of the EFOR network, Algae Workshop, 3d May 2017, Paris.
  • THOMAS François, CORRE Erwan, CEBRON Aurélie. DNA-SIP and metagenomic revealsshifts in active phenanthrene-degrading bacteria of rhizosphere and bulk soil from a historically contaminated site. 14th Symposium on Bacterial Genetics and Ecology "Talking with the neighbours" 4–8 June 2017. Aberdeen, Scotland
  • Laure Guillou, Erwan Corre, Christophe Six, Lourdes Velo Suarez, Ehsan Kayal. Possible hijacking of the host plastids by an intracellular parasite (Amoebophrya spp., Syndiniales) of microalgae. Microbiology Society 3-7April2017. Edinburgh UK 
  • Poster: Barbeyron T, Brillet-Guéguen L, Carré W., Carrière C, Caron C, Czjzek M, Hoebeke M, Michel G. Matching the diversity of sulfated biomolecules: creation of a classification database for sulfatases reflecting their substrate specificity. CBM12 - The 12th Carbohydrate Bioengineering Meeting, Vienna, Austria (April 23-26, 2017).
  • Hugo Doré, Mark Hoebeke. Cyanorak V2: Un système d’information pour la comparaison des génomes des picocyanobactéries marines. Gen2Bio 2017 - Nantes. Oral presentation.
  • Hugo DORE, Gregory FARRANT, Frédéric PARTENSKY, Florian HUMILY, Morgane RATIN, Antoine BISCH, Loraine GUÉGUEN, Mark HOEBEKE, Erwann CORRE, Gildas LE CORGUILLÉ, David J. SCANLAN and Laurence GARCZAREK. Genomic bases of long-term adaptation to environmental conditions in Prochlorococcus and Synechococcus. Annual Conference of the Microbiology Society, Edinburgh, April 2017. Oral presentation.
  • Gobet A., Corre E., Correc G., Delage L., Dittami S., Kleinjan H., Rousvoal S., Tanguy G. and Leblanc C. Characterization of the epiphytic bacterial community associated to the kelp Laminaria digitata.- 11th International Phycological Congress, 13-19 August 2017, Szczecin, Poland
  • Gildas Le Corguillé, Franck Giacomoni, Pierrick Roger-Mele, Christophe Duperier, Mélanie Pétéra, Yann Guitton, Marie Tremblay-Franco, Jean-François Martin, Cécile Canlet, Alexis Delabrière, Etienne Thévenot, Christophe Caron. Workflow4Metabolomics:Towards an international computing infrastructure and a tools showcase for Metabolomics. GCC2017, Montepellier, June 2017. Oral presentation.





  • Alexandre Cormier, Komlan Avia, Lieven Sterck, Thomas Derrien, Valentin Wucher, Gwendoline Andres;,Misharl Monsoor, Olivier Godfroy, Agnieszka Lipinska, Marie-Mathilde Perrineau, Yves Van De Peer, Christophe Hitte, Erwan Corre, Susana M. Coelho, J. Mark Cock. 2016. "Re-annotation, improved large-scale assembly and establishment of a catalogue of non-coding loci for the genome of the model brown alga Ectocarpus. New Phytologist. November 2016. DOI: 10.1111/nph.14321
  • Tristan Barbeyron, Loraine Brillet-Guéguen, Wilfrid Carré, Cathelène Carrière, Christophe Caron, Mirjam Czjzek, Mark Hoebeke and Gurvan Michel. Matching The Diversity Of Sulfated Biomolecules: Creation Of A Classification Database For Sulfatases Reflecting Their Substrate Specificity. PLOS ONE 11(10): e0164846. doi: 10.1371/journal.pone.016484
  • S. Djebali, V. Wucher, S. Foissac, C. Hitte, E. Corre, and T. Derrien, “Bioinformatics Pipeline for Transcriptome Sequencing Analysis,” in Methods in Molecular Biology, vol. 1468, no. 14, New York, NY: Springer New York, 2016, pp. 201–219.
  • Kim Huenerlage, Kévin Cascella, Erwan Corre, Lola Toomey, Friedrich Buchholz, Jean-Yves Toullec. The arctoboreal krill species Thysanoessa inermis and climate change: Linking transcriptomics and physiological responses to variations in environmental temperatures. Cell Stress and Chaperones August 2016 DOI: 10.1007/s12192-016-0720-6
  • Bussard A, Corre E, Hubas C, Duvernois-Berthet E, Le Corguillé G, Jourdren L, Coulpier F, Claquin P, Lopez PJ. Physiological adjustments and transcriptome reprogramming are involved in the acclimation to salinity gradients in diatoms. Environ Microbiol. 2016 May 28. doi: 10.1111/1462-2920.13398.
  • K. Wang, C. Del Castillo, E. Corre, E. Pales-Espinosa, and B. Allam. Clam focal and systemic immune responses to QPX infection revealed by RNA-seq technology. BMC Genomics, vol. 17, no. 1, p. 146, 201
  • Varet H, Brillet-Guéguen L, Coppée J-Y, Dillies M-A (2016) SARTools: A DESeq2- and EdgeR-Based R Pipeline for Comprehensive Differential Analysis of RNA-Seq Data. PLoS ONE 11 (6): e0157022. doi:10.1371/journal.pone.0157022

Oral communications

  • P. Potin, E. Corre and IDEALG WP leaders  (2016) Ten years of French and EU integrative research projects to capitalize on the breakthroughs  in algal biotechnology. Bioinformatics, Metabolic Engineering and Genomics in Biotechnological Applications. V Workshop CeBiB – 30 Nov–2 Dec 2016, Puerto Varas Chili. invited plenary lecture.

  • E. Corre. Les outils de bioinformatique au service de l’exploration des génomes d’algues marines.IDEALG Annual meeting Lorient France, 7 nov. 2016

  • E. Corre. La plate-forme bioinformatique ABiMS : un outil et des services dédiés au service du traitement de la donnée en biotechnologies marines. conférence Biosciences en Finistère. 12 octobre 2016 CCI de Brest

  • Loraine Brillet-Guéguen, Misharl Monsoor. Environment for analysis and annotation of macro algae genomes, infrastructure example on the ABiMS platform with GMOD tools. AG IDEALG, 8-9 November 2016, Lorient

  • Laure Guillou, Erwan Corre , Phuong Le, Dominique Marie, Estelle Bigeard ,Yves Van der Peer ,Stephane Rombauts ,Patrick Winker, Betina Porcel, Sarah Faraht.The paradox of being a specialist for a parasite of marine blooming dinoflagellates .A New Age of Discovery for Aquatic Microeukaryotes.EMBL Heidelberg, Germany Tuesday 26 January - Friday 29 January 2016


  • Arnaud Meng, Lucie Bittner, Stéphane Le Crom, Fabrice Not and Erwan Corre. De novo transcriptome assembly dedicated pipeline and its specific application to non-model, marine planktonic organisms. ECCB2016

  • L. Jacquemot, J. P. Monjol, Y. Bettarel, E. Corre, C. Ferrier-Pagès, T. Bouvier, C. Desnues, A-C. Baudoux.Phage therapy for diseased corals? Potential of a novel giant virus as biocontrol agent against coral pathogens.2016. 13th International Coral Reef Symposium, HAWAI'I, 19-24 June, 2016

  • Arnaud Meng, Lucie Bittner, Stéphane Le Crom, Fabrice Not and Erwan Corre. De novo transcriptome assembly dedicated pipeline and its specific application to non-model, marine planktonic organisms. ECCB2016

  • Lebreton Annie, Meslet-Cladière Laurence, Jany Jean-Luc, Barbier Georges, Corre Erwan. Etude comparative des génomes et transcriptomes de Mucor spp.. JOBIM 2016  Lyon 28 au 30 juin

  • Monsoor Misharl, Eric Fontanillas, Julie Baffard, Pierre-Guillaume Brun, Erwan Corre, Christophe Caron, Didier Jollivet. « AdaptSearch » : a galaxy pipeline for the search of adaptive mutations and positively selected genes from RNASeq orthologs . JOBIM 2016  Lyon 28 au 30 juin



  • Alexis Dereeper, Felix Homa, Gwendoline Andres, Guilhem Sempere, Gautier Sarah, Yann Hueber, Jean-François Dufayard and Manuel Ruiz. 2015. SNiPlay3: a web-based application for exploration and large scale analyses of genomic variations. Nucl. Acids Res. doi: 10.1093/nar/gkv351

  • Ronan Lagadec, Laurent Laguerre, Arnaud Menuet, Anis Amara, Claire Rocancourt, Pierre Péricard, Benoît G. Godard, Maria Celina Rodicio, Isabel Rodriguez-Moldes, Hélène Mayeur, Quentin Rougemont, Sylvie Mazan & Agnès Boutet. 2015. The ancestral role of nodal signalling in breaking L/R symmetry in the vertebrate forebrain. Nature Communications 6,  doi:10.1038/ncomms7686

  • James E. Tarver, Alexandre Cormier, Natalia Pinzón, Richard S. Taylor, Wilfrid Carré, Martina Strittmatter, Hervé Seitz, Susana M. Coelho and J. Mark Cock. microRNAs and the evolution of complex multicellularity: identification of a large, diverse complement of microRNAs in the brown alga Ectocarpus. Nucl. Acids Res. (27 July 2015) 43 (13): 6384-6398.; doi: 10.1093/nar/gkv578

  • Alejandra Medina-Rivera, Matthieu Defrance, Olivier Sand, Carl Herrmann, Jaime A. Castro-Mondragon, Jeremy Delerce,Sébastien Jaeger, Christophe Blanchet, Pierre Vincens, Christophe Caron, Daniel M. Staines, Bruno Contreras-Moreira,  Marie Artufel, Lucie Charbonnier-Khamvongsa,Céline Hernandez, Denis Thieffry, Morgane Thomas-Chollier, Jacques van Helden. RSAT 2015: Regulatory Sequence Analysis Tools. Nucleic Acids Res (2015) 43 (W1): W50-W56. DOI:

  • Dominique Boeuf, Stephane Audic, Loraine Brillet-Gueguen, Christophe Caron, Christian Jeanthon. 2015. MicRhoDE: a curated database for the analysis of microbial rhodopsin diversity and evolution Database 2015; doi: 10.1093/database/bav080

  • Marie Robert, Céline Zatylny-Gaudin, Vincent Fournier, Erwan Corre, Gildas Le Corguillé, Benoît Bernay, Joël Henry. (2015). Molecular characterization of peptide fractions of a Tilapia (Oreochromis niloticus) by-product hydrolysate and in vitro evaluation of antibacterial activity. Process Biochemestry. 12/2014; DOI:10.1016/j.procbio.2014.12.022

  • V. Cornet,B.Houyvet, J.Henry, B.Bernay,E.Corre, G. Le Corguillé, C. Zatylny-Gaudin. The Toll/NF-<kappa>B pathway in cuttlefish symbiotic accessory nidamental gland. Developmental Comparative Immunology Volume 53, Issue 1, November 2015,Pages 42–46

  • Zatylnyc-Gaudin Celine, Cornet Valérie, Leduc Alexandre, Zanuttini Bruno, Corre Erwan, Le Corguillé Gildas, Bernay Benoît, Garderes Johan, Kraut Alexandra, Couté Yohann & Henry Joël. Neuropeptidome of the cephalopod Sepia officinalis identification tissue mapping and expression pattern of neurotransmitters and neurohormones during egg-laying. Journal of Proteome Research. Decembre 2015 DOI: 10.1021/acs.jproteome.5b00463

  • Gregory Farrant, Mark Hoebeke, Frédéric Partensky, Gwendoline Andres, Erwan Corre and Laurence Garczarek. WiseScaffolder : an algorithm for the semi-automatic scaffolding of Next Generation Sequencing data. BMC Bioinformatics. 2015; 16(1): 281. doi: 10.1186/s12859-015-0705-y

  • Barbara Gasse; Xi Liu, Erwan Corre, Jean-Yves Sire. Amelotin gene structure and expression during enamel formation in the opossum Monodelphis domestica. PLoS One. 2015; 10(7): e0133314.

  • Cornet V, Henry J, Goux D, Duval E, Bernay B, Le Corguillé G, Corre E, et al. (2015) How Egg Case Proteins Can Protect Cuttlefish Offspring? PLoS One 10(7): e0132836. doi:10.1371/journal.pone.0132836

  • Simon M. Dittami, Laëtitia Duboscq-Bidot, Morgan Perennou, Angélique Gobet, Erwan Corre, Catherine Boyen, Thierry Tonon. Host-microbe interactions as a driver of brown algal acclimation to salinity gradients. The ISME Journal , (26 June 2015) | doi:10.1038/ismej.2015.104

  • Sergio Balzano, Erwan Corre, Johan Decelle, Roberto Sierra, Patrick Wincker, Corinne Da Silva, Julie Poulain, Jan Pawlowski, Fabrice Not. Transcriptome analyses to investigate symbiotic relationships between marine protists. Front Microbiol. 2015 Mar 17;6:98, section Microbial Physiology and Metabolism

Oral communications

  • Olivier Inizan, Gildas Le Corguillé et al. An initiative to federate the galactic community in France: the IFB Galaxy Working Group. GCC2015 Norwich. 7-8 of July

  • Thierry Tonon et al. Comparative analysis of marine and freshwater brown algae: insights into the biology and evolution of an extremophile Ectocarpus (9OR.14) EPC6 Londres. 23-28 August 2015

  • Simon Dittami et al. Microbiomes impact algal acclimation: the example of a freshwater strain of Ectocarpus (4KN.2) EPC6 Londres. 23-28 August 2015

  • Andres Gutierrez-Rodriguez, Daniel Richter, Arnaud Meng, Lucie Bittner, Erwan Corre, Fabrice Not. A physio-molecular integrative approach to assess global patterns of microalgal and photosymbiotic oxidative stress in marine environment. Conferences Jacques Monod. Marine Eco-Systems Biology. Roscoff (Brittany), France June 22-26, 2015.

  • Simon M. Dittami , Laëtitia Duboscq-Bidot , Morgan Perennou , Angélique Gobet , Erwan Corre , Thierry Tonon, Boyen Catherine. The association of marine bacteria with the brown alga Ectocarpus: a stress-resistant holobiont. Conferences Jacques Monod. Marine Eco-Systems Biology. Roscoff (Brittany), France June 22-26, 2015.

  • V. Cornet, B.Houyvet, J.Henry, D.Goux, E. Duval, B.Bernay, E.Corre, G. Le Corguillé, C. Zatylny-Gaudin. How cuttlefish protect their offsprin? Annual meeting of the society of Experimental Biology 30 june –3 july 2015, Pragues (Czech Republic).

  • C Zatylny-Gaudin, V. Cornet, M. Endress, B. Houyvet, B. Bernay, G. Le Corguillé, E. Corre, J. Henry. The impact of “omics” approaches in the understanding of reproduction and predation in the cuttlefish Sepia officinalis. Annual meeting of the society of Experimental Biology 30 june –3 july 2015, Pragues (Czech Republic). Communication affichée

  • V. Cornet, B.Houyvet, J.Henry, , B.Bernay, E.Corre, G. Le Corguillé, C. Zatylny-Gaudin. The Toll/NF-κB pathway: a key to beneficial bacterial symbiosis in cuttlefish reproductive glands. Annual meeting of the society of Experimental Biology 30 june –3 july 2015, Pragues (Czech Republic).

  • Joël Henry, Valérie Cornet, Alexandre Leduc, Bruno Zanuttini, Erwan Corre, Gildas Le Corguillé, Benoît Bernay, A Kraut, Céline Zatylny-Gaudin . Caractérisation du neuropeptidome de la seiche Sepia officinalis : identification des neuropeptides impliqués dans la ponte. 19ème Congrès du Groupe Français des Peptides et des Protéines .17-22 mai 2015 . Portbail, Normandie, France

  • Marie Robert, Alexandre Leduc, CéLine Zatylny-Gaudin, Benoit Bernay, Erwan Corre, Gildas Le Corguillé, Vincent Fournier et Joël Henry. Caractérisation structurale et fonctionnelle de deux hydrolysats fonctionnels destinés à l’alimentation d’espèces aquacoles. 19ème Congrès du Groupe Français des Peptides et des Protéines .17-22 mai 2015 . Portbail, Normandie, France.

  • V. Cornet, J. Henry, Didier Goux, E. Duval, E. Corre, G. Le Corguillé, B. Bernay, C. Zatylny-Gaudin. Les SepECPs : Une nouvelle classe de protéines capsulaires impliquées dans la protection de l’œuf chez Sepia officinalis.19ème Congrès du Groupe Français des Peptides et des Protéines .17-22 mai 2015 . Portbail, Normandie, France

  • Gildas Le Corguillé, Misharl Monsoor, W4M group et Christophe Caron, Workflow4Metabolomics : un environnement pour l’analyse à haut-débit. Gen2Bio. 26 mars. La Baule

  • Vaulot, D.; Lopes dos Santos, A.; Pollina, T.; Corre, E.: Picoeucaryote Metagenomes From The South-Eastern Pacific Ocean. ASLO 2015. Aquatic Sciences Meeting. 22-27 February 2015. Granada Spain

  • Lopes, A. S.; Gourvil, P.; Romac, S.; Pollina, T.; Corre, E.; Rodriguez-Hernandez, F.; Garrido, J. L.; Audic, S.; de Vargas, C.; Vaulot, D.: Ecological Diversity Of Prasinophytes Clade Vii, The Dominant Green Algae In Open Oceans. ASLO 2015. Aquatic Sciences Meeting: 22-27 February 2015. Granada Spain

  • L. Brillet-Guéguen, G. Le Corguillé, G. Andres, C. Caron, V. Loux. Planemo: no more crap! Galaxy Day 2015, Paris


  • Marie TREMBLAY-FRANCO, Cécile CANLET, Yann GUITTON, Daniel JACOB, Gildas LE CORGUILLE, Jean-François MARTIN, Misharl MONSOOR, Nils PAULHE, Mélanie PETERA, Camille VACQUIE, Franck GIACOMONI, Estelle PUJOS-GUILLOT, Christophe CARON, Etienne THEVENOT. New tools and workflows on W4M, The Galaxy matabolomic infrastructure. RFMF. 9 au 11 juin 2015. Lilles

  • Gildas Le Corguillé, Misharl Monsoor, W4M group et Christophe Caron, Workflow4Metabolomics : un environnement pour l’analyse à haut-débit. Gen2Bio. 26 mars 2015. La Baule

  • L. Brillet- Guéguen, C. Caron, V. Loux and the French Galaxy Working Group. A French Galaxy Tool Shed to federate the national infrastructures and offering quality assessed tools. Galaxy Community Conference 2015 et Actes Jobim 2015

  • Liu X, Corre E and Sire JY. Looking for Secretory Calcium-Binding PhosphoProtein (SCPP) transcripts in jaw transcriptomes. F1000Research 2015, 4:874 (doi: 10.7490/f1000research.1110625.1)

  • Arnaud Meng, Lucie Bittner, Anita Annamale, Fabrice Not, Erwan Corre, Stéphane Le Crom. De novo assembly pipeline for transcriptomic analysis. JOBIM 2015. F1000Research 2015, 4:533 (doi: 10.7490/f1000research.1110281.1)

  • Noé Pontoizeau, Simon M. Dittami, Irene Gonzàlez, André E. Minoche, Alexandre Cormier, Pierre Pericard, Erwan Corre, Catherine Boyen, Heinz Himmelbauer, Thierry Tonon. Comparative Analysis of Marine and  Freshwater Brown Algae: Insights Into the Biology and Evolution of an Extremophile Ectocarpus. Actes Jobim 2015

  • Caroline VERNETTE, Emma PRUDENT, Erwan CORRE, Gildas LE CORGUILLÉ, Christophe CARON. Enhanced Blast on Galaxy. Actes Jobim 2015