The platform ABiMS offers resources around a dedicated data center (Marine Genomic Data Center).
This data center is destined to data storage and security, as well as their analyses.
It represents :
This infrastructure has been financed by multiple sources :
-
Région Bretagne - BioGenOuest
-
Conseil Général - CG29
-
ANR projects
-
Station Biologique de Roscoff: FR2424, UMR7139, UMR7144, UMR7150
-
Investissements d'Avenir projects: EMBRC-France, IDEALG, Océanomics, IFB
-
GRSIBI projects.
In 2013, 90% of the CPU resources involved collaborative projects with at less one partner from the "Station Biologique de Roscoff"; 10 % were used for fully external projects.
Please have a look at this
Documentation provided by the IFB NNCR Cluster TaskForce before using the Cluster.
With the IFB Core Cluster, we share all our pratices.
DIFFERENTS TYPES OF NODE
sinfo -Nel --format "%.8N %.9R %.4c %.7z %.7m"
NODELIST |
PARTITION |
CPUS |
Socket:Core:Thread |
MEMORY IN MB |
---|
n75 |
fast |
254 |
2:127:1 |
257445 |
n82 |
fast |
30 |
2:15:1 |
128882 |
n84 |
fast |
30 |
2:15:1 |
128882 |
n84 |
long |
30 |
2:15:1 |
128882 |
n86 |
fast |
30 |
2:15:1 |
128882 |
n86 |
long |
30 |
2:15:1 |
128882 |
n87 |
fast |
30 |
2:15:1 |
112754 |
n87 |
long |
30 |
2:15:1 |
112754 |
n88 |
fast |
30 |
2:15:1 |
128882 |
n88 |
long |
30 |
2:15:1 |
128882 |
n89 |
fast |
30 |
2:15:1 |
128882 |
n89 |
long |
30 |
2:15:1 |
128882 |
n90 |
fast |
30 |
2:15:1 |
128882 |
n90 |
long |
30 |
2:15:1 |
128882 |
n91 |
fast |
30 |
2:15:1 |
128882 |
n91 |
long |
30 |
2:15:1 |
128882 |
n92 |
fast |
30 |
2:15:1 |
128882 |
n92 |
long |
30 |
2:15:1 |
128882 |
n93 |
fast |
30 |
2:15:1 |
128882 |
n93 |
long |
30 |
2:15:1 |
128882 |
n94 |
fast |
30 |
2:15:1 |
128882 |
n94 |
long |
30 |
2:15:1 |
128882 |
n95 |
fast |
30 |
2:15:1 |
128882 |
n95 |
long |
30 |
2:15:1 |
128882 |
n96 |
fast |
254 |
2:127:1 |
257445 |
n96 |
long |
254 |
2:127:1 |
257445 |
n97 |
fast |
254 |
2:127:1 |
257445 |
n97 |
long |
254 |
2:127:1 |
257445 |
n98 |
fast |
126 |
2:63:1 |
257468 |
n98 |
long |
126 |
2:63:1 |
257468 |
n99 |
bigmem |
80 |
4:10:2 |
1032076 |
n100 |
bigmem |
128 |
4:16:2 |
2064169 |
n115 |
fast |
46 |
2:23:1 |
257859 |
n115 |
long |
46 |
2:23:1 |
257859 |
n117 |
fast |
46 |
2:23:1 |
257859 |
n117 |
long |
46 |
2:23:1 |
257859 |
n118 |
fast |
46 |
2:23:1 |
257859 |
n118 |
long |
46 |
2:23:1 |
257859 |
The available partitions are:
scontrol show partition
sacctmgr list qos format=Name,Priority,MaxTRESPU%20
|
Time out |
Default resources |
Max resources / user |
Purpose |
---|
fast |
24 hours |
--cpu-per-task 1 --mem 2GB |
cpu=200, mem=750GB |
Regular jobs |
---|
long |
30 days |
--cpu-per-task 1 --mem 2GB |
cpu=200, mem=750GB |
Long jobs |
---|
bigmem |
60 days |
--cpu-per-task 1 --mem 2GB |
mem=1.9TB |
On demande. For treatements requiring a lot of RAM |
---|